2024-11-30_00000223
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ligand
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9EGU
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with TO-599;
X-ray diffraction 1.27Å
Protein #1
357 residues (100% resolved)
Raw Sequence ...
PITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAHAPFWSSLR
Canonical Sequence ...
PITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAHAPFWSSLR
Non polymer #2
A1BH9
InChI=1S/C18H17N3O4S2/c22-18(20-23)16-5-3-14(4-6-16)11-21(12-15-2-1-8-19-10-15)27(24,25)17-7-9-26-13-17/h1-10,13,23H,11-12H2,(H,20,22)
InChI=1S/C18H17N3O4S2/c22-18(20-23)16-5-3-14(4-6-16)11-21(12-15-2-1-8-19-10-15)27(24,25)17-7-9-26-13-17/h1-10,13,23H,11-12H2,(H,20,22)
SMILES: c1cc(cnc1)CN(Cc2ccc(cc2)C(=O)NO)S(=O)(=O)c3ccsc3
c1cc(cnc1)CN(Cc2ccc(cc2)C(=O)NO)S(=O)(=O)c3ccsc3
Non polymer #3
K
InChI=1S/K/q+1
InChI=1S/K/q+1
SMILES: [K+]
[K+]
Non polymer #4
ZN
InChI=1S/Zn/q+2
InChI=1S/Zn/q+2
SMILES: [Zn+2]
[Zn+2]
Biounit #1
monomer
Download coordinates
Biounit #2
monomer
Download coordinates
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Model
Reference
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