2024-11-02_00000110|hard|8S35

DNA-bound Type IV-A3 CRISPR effector in complex with DinG helicase from K. pneumoniae (state I); Electron microscopy 2.90Å
Protein #1 350 residues (98% resolved)

MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH

MRTLNFNGKISTLEPLTVTVKNAVSTSGHRLPRNGGFNAAPYFPGTSIRGTLRHAAHKVIVDRVGLNADGKSPFDLAEHFMLAQGVDINGEAETFAPGEINAGAELRSKNPLISLFGRWGLSGKVGIGNAIPDGDNQWGMFGGGARSIMFQRDESLMEFLETDQVDRLERLLEEQAEASVDISQIKTEQDALKKAMKSADKDTKAELQIKVRELDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEAHWTVTTWKPGELVPVTLGEIVITPNGVEITGDELFAMVKAFNENQSFDFTARGHHHHHH
Protein #2 235 residues (100% resolved)

MLNFKPYRVIMSSLTPVVISGIAPSLDGILYEALSQAIPSNEPGVVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATTSMRCDYLSPEKLSTAMFSPRTRRGLFTRVLLTGGPTKRRMTTRPAYSAPYLTFDFVGSSEAVEILLNHAHVGVGYDYFSAANGEFNNVTILPLDIDTSISNEGMALRPVPVNSGLNGIKGVSPLIPPYFVGEKLNIVHPAPVRTQLISSLLRG

MLNFKPYRVIMSSLTPVVISGIAPSLDGILYEALSQAIPSNEPGVVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATTSMRCDYLSPEKLSTAMFSPRTRRGLFTRVLLTGGPTKRRMTTRPAYSAPYLTFDFVGSSEAVEILLNHAHVGVGYDYFSAANGEFNNVTILPLDIDTSISNEGMALRPVPVNSGLNGIKGVSPLIPPYFVGEKLNIVHPAPVRTQLISSLLRG
Protein #3 263 residues (100% resolved)

MNHPVESVYSALTSILLPYMGEPVPVQRNCSCCGRAPSEFDGVGFELVNAYRERVVHCRPCQTFFVSAPELMGVENPKKPTTGQKFGMWSGVGAVINVEDNSSVLLAPQGVVNKLPEHFFDHVEVITATSGQHLEYLFNTELKFPLIYIQNFGVKTYELVRSLRVSLSADAIYTCADQLLTRQNEVLYMLDLKKAKELHQEIKNYSKKEMDIFIRTVTLLAYSRITPEAASNEFKKNNLIPLLLLLPTDPHQRLSILHLLKKV

MNHPVESVYSALTSILLPYMGEPVPVQRNCSCCGRAPSEFDGVGFELVNAYRERVVHCRPCQTFFVSAPELMGVENPKKPTTGQKFGMWSGVGAVINVEDNSSVLLAPQGVVNKLPEHFFDHVEVITATSGQHLEYLFNTELKFPLIYIQNFGVKTYELVRSLRVSLSADAIYTCADQLLTRQNEVLYMLDLKKAKELHQEIKNYSKKEMDIFIRTVTLLAYSRITPEAASNEFKKNNLIPLLLLLPTDPHQRLSILHLLKKV
RNA #4 61 bases

UUAUCGGCGAGACCGGGAUGCACCUCCCGAAGGGUCUCGGUGUUUCCCCUGCGUGCGGGGG

UUAUCGGCGAGACCGGGAUGCACCUCCCGAAGGGUCUCGGUGUUUCCCCUGCGUGCGGGGG
DNA #5 60 bases

(DC)(DC)(DC)(DT)(DC)(DC)(DC)(DT)(DC)(DC)(DA)(DG)(DC)(DT)(DT)(DC)(DC)(DG)(DA)(DG)(DA)(DC)(DC)(DC)(DT)(DT)(DC)(DG)(DG)(DG)(DA)(DG)(DG)(DT)(DG)(DC)(DA)(DT)(DC)(DC)(DC)(DG)(DG)(DT)(DC)(DT)(DC)(DG)(DC)(DT)(DT)(DG)(DG)(DC)(DC)(DT)(DC)(DC)(DT)(DC)

CCCTCCCTCCAGCTTCCGAGACCCTTCGGGAGGTGCATCCCGGTCTCGCTTGGCCTCCTC
DNA #6 60 bases

(DG)(DA)(DG)(DG)(DA)(DG)(DG)(DC)(DC)(DA)(DA)(DG)(DA)(DT)(DC)(DT)(DC)(DA)(DA)(DT)(DT)(DT)(DC)(DG)(DT)(DA)(DC)(DA)(DA)(DG)(DA)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DT)(DG)(DA)(DG)(DA)(DT)(DG)(DA)(DA)(DG)(DC)(DT)(DG)(DG)(DA)(DG)(DG)(DG)(DA)(DG)(DG)(DG)

GAGGAGGCCAAGATCTCAATTTCGTACAAGAAATCCTTTGAGATGAAGCTGGAGGGAGGG
Protein #7 624 residues (100% resolved)

MNTSAVFESAGLSLRKVQQDYIEAAAGALTQDHKVALISAETGVGKTLGYLVPALLILLKNPEAKFVIATNSHALMHQIFRSDRPLLEQIAEQCGIKVTFSRLMGKANYVSLEKVRGLLLMDEFTDLDTVKVLEKLANWSKPLVEFEEEYGELPAQITPEMVTYSIWDDIQDIDDIRLNALSANFIVTTHAMVMVDCMCNHRILGDKENMYLIIDEADIFVDMLEVWKQRRFNLRELTSAFNEHIPRNGVHVIDQLMNDVTSIAGDLHFCSTPAAVALFDNSFNALSKVGREIKNEAARKAFFDCIYSWEMLGLSGGQKGVGVSNKRREPALIAVNPFIGMNVGRYCTQWRSALLTSATLSITSTPETGMEWLCKALGLTSDTISIRKIFSPDVYGSMKLTIAGADFPKVFNDPKEQIFSGQWLKAVVEQLSCIQGPALVLTASHYETRMIANQLGEVSQPVYIQKAGQALSEIIKQYQEKPGILISAGASVGVSPRGENGEQIFQDLIITRIPFLPPDRMKAESLYGYLKERGYSRTFEAVNRNIYLENLRKVIRKAKQSVGRGIRSENDTVRIIILDPRFPEPTDLSSKHRSLEHIIPVRFRREYRSCEILSPAYFEEDIQC

MNTSAVFESAGLSLRKVQQDYIEAAAGALTQDHKVALISAETGVGKTLGYLVPALLILLKNPEAKFVIATNSHALMHQIFRSDRPLLEQIAEQCGIKVTFSRLMGKANYVSLEKVRGLLLMDEFTDLDTVKVLEKLANWSKPLVEFEEEYGELPAQITPEMVTYSIWDDIQDIDDIRLNALSANFIVTTHAMVMVDCMCNHRILGDKENMYLIIDEADIFVDMLEVWKQRRFNLRELTSAFNEHIPRNGVHVIDQLMNDVTSIAGDLHFCSTPAAVALFDNSFNALSKVGREIKNEAARKAFFDCIYSWEMLGLSGGQKGVGVSNKRREPALIAVNPFIGMNVGRYCTQWRSALLTSATLSITSTPETGMEWLCKALGLTSDTISIRKIFSPDVYGSMKLTIAGADFPKVFNDPKEQIFSGQWLKAVVEQLSCIQGPALVLTASHYETRMIANQLGEVSQPVYIQKAGQALSEIIKQYQEKPGILISAGASVGVSPRGENGEQIFQDLIITRIPFLPPDRMKAESLYGYLKERGYSRTFEAVNRNIYLENLRKVIRKAKQSVGRGIRSENDTVRIIILDPRFPEPTDLSSKHRSLEHIIPVRFRREYRSCEILSPAYFEEDIQC
Non polymer #8 ZN

InChI=1S/Zn/q+2

[Zn+2]
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Reference