2024-09-28_00000209
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hard
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9C6L
Yasminevirus c12orf29, a 5' to 3' RNA ligase;
X-ray diffraction 2.70Å
Protein #1
277 residues (89% resolved)
Raw Sequence ...
SMSDMNSESKSNTVSDKMCEVHDKISAILVCAHVKGTETEKAGRSGEKYLATNCLNPGLISAIQAGARVVPTAKTDGTCCRVFNGKIQKRRDIKPGREVPEGWIQTGSDEKSGHLIGFMDLEKGDKWHYDCHVKDPSSPSGLDINKVLCITTNKAGDALVYEEVNIADLNGHTVELMGPKFQSNPHGLKAHCLMRHGTVKLTDFPDLRDYVSVDGAEPLKENALADIRNWFLNSKQGPHLEGVVLHLDNGEMYKLHRHHLDLEWSAKSARPLDQIPL
Canonical Sequence ...
SMSDMNSESKSNTVSDKMCEVHDKISAILVCAHVKGTETEKAGRSGEKYLATNCLNPGLISAIQAGARVVPTAKTDGTCCRVFNGKIQKRRDIKPGREVPEGWIQTGSDEKSGHLIGFMDLEKGDKWHYDCHVKDPSSPSGLDINKVLCITTNKAGDALVYEEVNIADLNGHTVELMGPKFQSNPHGLKAHCLMRHGTVKLTDFPDLRDYVSVDGAEPLKENALADIRNWFLNSKQGPHLEGVVLHLDNGEMYKLHRHHLDLEWSAKSARPLDQIPL
Non polymer #2
AMP
InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
SMILES: c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
Non polymer #3
MG
InChI=1S/Mg/q+2
InChI=1S/Mg/q+2
SMILES: [Mg+2]
[Mg+2]
Non polymer #4
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Biounit #1
homo-trimer
Download coordinates
Biounit #2
homo-trimer
Download coordinates
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Model
Reference
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