2024-08-31_00000339|hard|9EZY

Vibrio cholerae DdmD-DdmE holo complex; Electron microscopy 2.56Å
Protein #1 1193 residues (95% resolved)

SNAMNVSIEEFTHFDFQLVPEPSPLDLVITEPLKNHIEVNGVKSGALLPLPFQTGIGKTYTALNFLLQQMLEQVRSELKEENTGKKSKRLLYYVTDSVDNVVSAKADLLKLIEKQTVKGEPRFTLEQQEYLKAQIVHLPNQSEQLLQCSDAVLNDVLIGFNLNAERDVQAEWSAISGLRRHASNPEVKISLNRQAGYFYRNLIDRLQKKQKGADRVLLSGSLLASVETLLPGEKIRNGSAHVAFLTTSKFLKGFHNTRSRYSPLRDLSGAVLIIDEIDKQNQVILSELCKQQAQDLIWAIRTLRANFRDHQLESSPRYDKIEDLFEPLRERLEEFGTNWNLAFAFNTEGANLNERPVRLFSDRSFTHVSSATHKLSLKSDFLRRKNLIFSDEKVEGSLIEKHGLLTRFVNEADVIYQWFLGTMRKAVFQYWENVRGLEIEVRENRSLEGTFQEAVQSLLTHFNLQEFESAVYESFDTRGLRQSAGGKANKLSSSKSYHHTGLKLVEVAHNQGTRDTVNCKASFLNTSPSGVLADMVDAGAVILGISATARADTVIHNFDFKYLNERLGNKLLSLSREQKQRVNNYYHSRRNYKDNGVVLTVKYLNSRDAFLDALLEEYKPEARSSHFILNHYLGIAESEQAFVRSWLSKLLASIKAFISSPDNRYMLSLLNRTLDTTRQNINDFIQFCCDKWAKEFNVKTKTFFGVNADWMRLVGYDEISKHLNTELGKVVVFSTYASMGAGKNPDYAVNLALEGESLISVADVTYSTQLRSDIDSIYLEKPTQLLLSDDYSHTANQLCQFHQILSLQENGELSPKSAENWCRQQLMGMSRERSLQQYHQTSDYQSAVRKYIEQAVGRAGRTSLKRKQILLFVDSGLKEILAEESRDPSLFSHEYVALVNKAKSAGKSIVEDRAVRRLFNLAQRNNKDGMLSIKALVHRLHNQPASKSDIQEWQDIRTQLLRYPTVAFQPERFNRLYLQSMTKGYYRYQGNLDGDPNSFEFFDRVPYGDMVSEEDCSLATLVQNQYVRPWFERKGFACSWQKEANVMTPIMFTNIYKGALGEQAVEAVLTAFDFTFEEVPNSIYERFDNRVIFAGIEQPIWLDSKYWKHEGNESSEGYSSKIALVEEEFGPSKFIYVNALGDTSKPIRYLNSCFVETSPQLAKVIEIPALIDDSNADTNRTAVQELIKWLHHS

SNAMNVSIEEFTHFDFQLVPEPSPLDLVITEPLKNHIEVNGVKSGALLPLPFQTGIGKTYTALNFLLQQMLEQVRSELKEENTGKKSKRLLYYVTDSVDNVVSAKADLLKLIEKQTVKGEPRFTLEQQEYLKAQIVHLPNQSEQLLQCSDAVLNDVLIGFNLNAERDVQAEWSAISGLRRHASNPEVKISLNRQAGYFYRNLIDRLQKKQKGADRVLLSGSLLASVETLLPGEKIRNGSAHVAFLTTSKFLKGFHNTRSRYSPLRDLSGAVLIIDEIDKQNQVILSELCKQQAQDLIWAIRTLRANFRDHQLESSPRYDKIEDLFEPLRERLEEFGTNWNLAFAFNTEGANLNERPVRLFSDRSFTHVSSATHKLSLKSDFLRRKNLIFSDEKVEGSLIEKHGLLTRFVNEADVIYQWFLGTMRKAVFQYWENVRGLEIEVRENRSLEGTFQEAVQSLLTHFNLQEFESAVYESFDTRGLRQSAGGKANKLSSSKSYHHTGLKLVEVAHNQGTRDTVNCKASFLNTSPSGVLADMVDAGAVILGISATARADTVIHNFDFKYLNERLGNKLLSLSREQKQRVNNYYHSRRNYKDNGVVLTVKYLNSRDAFLDALLEEYKPEARSSHFILNHYLGIAESEQAFVRSWLSKLLASIKAFISSPDNRYMLSLLNRTLDTTRQNINDFIQFCCDKWAKEFNVKTKTFFGVNADWMRLVGYDEISKHLNTELGKVVVFSTYASMGAGKNPDYAVNLALEGESLISVADVTYSTQLRSDIDSIYLEKPTQLLLSDDYSHTANQLCQFHQILSLQENGELSPKSAENWCRQQLMGMSRERSLQQYHQTSDYQSAVRKYIEQAVGRAGRTSLKRKQILLFVDSGLKEILAEESRDPSLFSHEYVALVNKAKSAGKSIVEDRAVRRLFNLAQRNNKDGMLSIKALVHRLHNQPASKSDIQEWQDIRTQLLRYPTVAFQPERFNRLYLQSMTKGYYRYQGNLDGDPNSFEFFDRVPYGDMVSEEDCSLATLVQNQYVRPWFERKGFACSWQKEANVMTPIMFTNIYKGALGEQAVEAVLTAFDFTFEEVPNSIYERFDNRVIFAGIEQPIWLDSKYWKHEGNESSEGYSSKIALVEEEFGPSKFIYVNALGDTSKPIRYLNSCFVETSPQLAKVIEIPALIDDSNADTNRTAVQELIKWLHHS
Protein #2 690 residues (95% resolved)

SNAMVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITKESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHVFHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDDVAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS

SNAMVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITKESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHVFHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDDVAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS
DNA #3 15 bases

(DA)(DT)(DA)(DA)(DT)(DT)(DC)(DT)(DG)(DT)(DC)(DC)(DA)(DG)(DA)

ATAATTCTGTCCAGA
DNA #4 66 bases

(DA)(DT)(DC)(DT)(DA)(DT)(DC)(DT)(DG)(DA)(DT)(DC)(DG)(DT)(DT)(DG)(DT)(DC)(DG)(DT)(DC)(DG)(DT)(DC)(DT)(DG)(DG)(DA)(DC)(DA)(DG)(DA)(DA)(DT)(DT)(DA)(DC)(DT)(DG)(DG)(DT)(DA)(DA)(DC)(DT)(DA)(DC)(DG)(DG)(DT)(DG)(DG)(DA)(DC)(DA)(DA)(DT)(DG)(DC)(DT)(DA)(DC)(DC)(DT)(DT)(DA)

ATCTATCTGATCGTTGTCGTCGTCTGGACAGAATTACTGGTAACTACGGTGGACAATGCTACCTTA
DNA #5 66 bases

(DT)(DA)(DA)(DG)(DG)(DT)(DA)(DG)(DC)(DA)(DT)(DT)(DG)(DT)(DC)(DC)(DA)(DC)(DC)(DG)(DT)(DA)(DG)(DT)(DT)(DA)(DC)(DC)(DA)(DG)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DG)(DA)(DC)(DG)(DA)(DC)(DA)(DA)(DC)(DG)(DA)(DT)(DC)(DA)(DG)(DA)(DT)(DA)(DG)(DA)(DT)

TAAGGTAGCATTGTCCACCGTAGTTACCAGTTTTTTTTTTTTTTCGACGACAACGATCAGATAGAT
Non polymer #6 MG

InChI=1S/Mg/q+2

[Mg+2]
Download coordinates
Reference