2024-08-24_00000025|ligand|8RYI

Metformin hydrolase from Aminobacter niigataensis MD1 with urea in the active site; X-ray diffraction 2.06Å
Protein #1 348 residues (97% resolved)

MNPAKSYAHLFSPLGGDAGDNYRAPGLITFLRSAHVPLNAEALKACGAKYAFVGVPFDEGNIGKPGSEDAPREFRLITQEYFSYWFEYNVDLHGKAVDCGDVSMPKVSPEVAHERIYRAVREVLKSGLIPIICGGDRSISITAARALSDHIGPQKKMGYMHFGAQLDMADSWAGERNLAPCAMARITELPNLDIRNVAHLGARNAMNPKDHIDLSKERGLQYDSMFDLFDAGIYPLVERSIDRVWSGTDAQYLGFNFNVMDSSTAPGVTSTEPGGLESREMMRIVDMIAKRGGVSVIDLTELCPIFDISGTAARLAACVIMRLMASLAAQDGDVIDDKLRRTDLVAAE

MNPAKSYAHLFSPLGGDAGDNYRAPGLITFLRSAHVPLNAEALKACGAKYAFVGVPFDEGNIGKPGSEDAPREFRLITQEYFSYWFEYNVDLHGKAVDCGDVSMPKVSPEVAHERIYRAVREVLKSGLIPIICGGDRSISITAARALSDHIGPQKKMGYMHFGAQLDMADSWAGERNLAPCAMARITELPNLDIRNVAHLGARNAMNPKDHIDLSKERGLQYDSMFDLFDAGIYPLVERSIDRVWSGTDAQYLGFNFNVMDSSTAPGVTSTEPGGLESREMMRIVDMIAKRGGVSVIDLTELCPIFDISGTAARLAACVIMRLMASLAAQDGDVIDDKLRRTDLVAAE
Protein #2 376 residues (96% resolved)

MAWSHPQFEKVENLYFQGAMLDRKTETAKWQFTPHQHRGPAEQFGENDHIYSPKLHNGSFKSRGLATFMGAPYCPPDRHKIREMGAKICFLAVPWDQGQIVRAGASQGAAGLRDATTQYFPYMFEYDVDLLSFFRVVDCGDVPTVPGNNIKSQEYTADYVTECLEGGAKVILFGGDHSLPIPGAKALSRFTGSGKMGYLHVDCHLDAGPDWAGNLITNCSGAPRALDLPNCNARNMAHMGSRNSLNPKDWWDFYVDNEIRVVTMPEMIERGLEVCANEIFERVKKDTDSLYFTWDTDSIDISCMPANSAPECYGLKGREVIQLARIAGRHGCDILDIVELCPDFDPSQISVKMTVNMIYHYLGSRAQTLRQQGKQP

MAWSHPQFEKVENLYFQGAMLDRKTETAKWQFTPHQHRGPAEQFGENDHIYSPKLHNGSFKSRGLATFMGAPYCPPDRHKIREMGAKICFLAVPWDQGQIVRAGASQGAAGLRDATTQYFPYMFEYDVDLLSFFRVVDCGDVPTVPGNNIKSQEYTADYVTECLEGGAKVILFGGDHSLPIPGAKALSRFTGSGKMGYLHVDCHLDAGPDWAGNLITNCSGAPRALDLPNCNARNMAHMGSRNSLNPKDWWDFYVDNEIRVVTMPEMIERGLEVCANEIFERVKKDTDSLYFTWDTDSIDISCMPANSAPECYGLKGREVIQLARIAGRHGCDILDIVELCPDFDPSQISVKMTVNMIYHYLGSRAQTLRQQGKQP
Non polymer #3 C5J

InChI=1S/C2H5N3O2/c3-1(6)5-2(4)7/h(H5,3,4,5,6,7)

C(=O)(N)NC(=O)N
Non polymer #4 CA

InChI=1S/Ca/q+2

[Ca+2]
Non polymer #5 NI

InChI=1S/Ni/q+2

[Ni+2]
Non polymer #6 URE

InChI=1S/CH4N2O/c2-1(3)4/h(H4,2,3,4)

C(=O)(N)N
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Reference