2024-07-27_00000141
|
hard
|
8XX0
Crystal structure of anti-IgE antibody HMK-12 Fab complexed with IgE F(ab')2;
X-ray diffraction 2.90Å
Protein #1
214 residues (100% resolved)
Raw Sequence ...
DVQMNQSPSNLAASPGETVSINCKASKSISRYLAWYQQKPGKANKLLIFSGSTLQSGTPSRFSGSGSGTDFTLTIRNLEPEDFGLYFCQQHNEFPLTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Canonical Sequence ...
DVQMNQSPSNLAASPGETVSINCKASKSISRYLAWYQQKPGKANKLLIFSGSTLQSGTPSRFSGSGSGTDFTLTIRNLEPEDFGLYFCQQHNEFPLTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Protein #2
225 residues (99% resolved)
Raw Sequence ...
DVQLQESGPGFVTPSQSLSVTCSVTGYSLTASSYFWNWIRKFPGNKLEWMGYIGYDGSVYYNPSLKSRISITRDTSKRQFFLQLKTVTNDDTALYYCARHGYYSSRVMDAWGQGTSVTVSSAKTTAPSVYPLAPGSGDTTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRGPTI
Canonical Sequence ...
DVQLQESGPGFVTPSQSLSVTCSVTGYSLTASSYFWNWIRKFPGNKLEWMGYIGYDGSVYYNPSLKSRISITRDTSKRQFFLQLKTVTNDDTALYYCARHGYYSSRVMDAWGQGTSVTVSSAKTTAPSVYPLAPGSGDTTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRGPTI
Protein #3
321 residues (97% resolved)
Raw Sequence ...
EVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSSASIRNPQLYPLKPCKGTASMTLGCLVKDYFPGPVTVTWYSDSLNMSTVNFPALGSELKVTTSQVTSWGKSAKNFTCHVTHPPSFNESRTILVRPVNITEPTLELLHSSCDPNAFHSTIQLYCFIYGHILNDVSVSWLMDDREITDTLAQTVLIKEEGKLASTCSKLNITEQQWMSESTFTCKVTSQGVDYLAHTRRCPDHE
Canonical Sequence ...
EVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSSASIRNPQLYPLKPCKGTASMTLGCLVKDYFPGPVTVTWYSDSLNMSTVNFPALGSELKVTTSQVTSWGKSAKNFTCHVTHPPSFNESRTILVRPVNITEPTLELLHSSCDPNAFHSTIQLYCFIYGHILNDVSVSWLMDDREITDTLAQTVLIKEEGKLASTCSKLNITEQQWMSESTFTCKVTSQGVDYLAHTRRCPDHE
Protein #4
215 residues (98% resolved)
Raw Sequence ...
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTAGAWERHNSYSCQVTHEGHTVEKSLSRADCS
Canonical Sequence ...
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTAGAWERHNSYSCQVTHEGHTVEKSLSRADCS
Non polymer #5
BOG
InChI=1S/C14H28O6/c1-2-3-4-5-6-7-8-19-14-13(18)12(17)11(16)10(9-15)20-14/h10-18H,2-9H2,1H3/t10-,11-,12+,13-,14-/m1/s1
InChI=1S/C14H28O6/c1-2-3-4-5-6-7-8-19-14-13(18)12(17)11(16)10(9-15)20-14/h10-18H,2-9H2,1H3/t10-,11-,12+,13-,14-/m1/s1
SMILES: CCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
Non polymer #6
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Biounit #1
hetero-2-2-2-2-2-mer
Download coordinates
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Model
Reference
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