2024-07-06_00000156
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ligand
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8PNX
Crystal structure of D-amino acid aminotransferase from Blastococcus saxobsidens in PMP form;
X-ray diffraction 1.80Å
Protein #1
281 residues (99% resolved)
Raw Sequence ...
MNEQRSVAVWRDGAAVTVPAHQPVVTAFDLGLGRGDGIFESVAVVAGRTPHLAAHLTRLTRSAALLGLPAPGDQAWMEMVAAVLADWPAALEGVCRLFLTRGLGDGTPPTALALLAPVPADTLRQRAEGISVATLGLGVPADFRAGAPWLLGGAKTLSYAVNMAAQRHAHDLGADDVVFTSLEGRLLEGPTSTVVWAAGGTLHTPPVETGILPGTTQARLFTAAAADGWPTSVTPGTVDDLHAADAVWLLSGVRGAAVVHTVDGVRRGDGDLSRRVRELLA
Canonical Sequence ...
MNEQRSVAVWRDGAAVTVPAHQPVVTAFDLGLGRGDGIFESVAVVAGRTPHLAAHLTRLTRSAALLGLPAPGDQAWMEMVAAVLADWPAALEGVCRLFLTRGLGDGTPPTALALLAPVPADTLRQRAEGISVATLGLGVPADFRAGAPWLLGGAKTLSYAVNMAAQRHAHDLGADDVVFTSLEGRLLEGPTSTVVWAAGGTLHTPPVETGILPGTTQARLFTAAAADGWPTSVTPGTVDDLHAADAVWLLSGVRGAAVVHTVDGVRRGDGDLSRRVRELLA
Non polymer #2
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #3
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Non polymer #4
PMP
InChI=1S/C8H13N2O5P/c1-5-8(11)7(2-9)6(3-10-5)4-15-16(12,13)14/h3,11H,2,4,9H2,1H3,(H2,12,13,14)
InChI=1S/C8H13N2O5P/c1-5-8(11)7(2-9)6(3-10-5)4-15-16(12,13)14/h3,11H,2,4,9H2,1H3,(H2,12,13,14)
SMILES: Cc1c(c(c(cn1)COP(=O)(O)O)CN)O
Cc1c(c(c(cn1)COP(=O)(O)O)CN)O
Biounit #1
homo-dimer
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Model
Reference
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