2024-06-22_00000218
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ligand
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8TKZ
Structure of fission yeast Duf89 protein bound to Co2+ and PO4;
X-ray diffraction 2.06Å
Protein #1
443 residues (97% resolved)
Raw Sequence ...
SMGLKLLHPPKPYAMTSDPESYASVCVMKKWPIIATNVIDEVSRNISKALEAGMSDKAAYVTQGKEIISLLNQLKYDLQHNRPLKPLVGQGPDIDDYNEELEQVGPLTWGDAPWLYAGCYFYRIMSLFFQARSEWNRHDPFFEQKDFTLRSSKSAIEEFAKRYVHLNSELASIQENKDDKAAYMIFVEMAEISLWGNAIDLGLLVNATYEQLQSLQGQKAVEESQKNILVNDFPKIWSKLSKVRHGRIDFVLNNAGFELFVDLLFATYLLKTEIAETIILHPKDVPWFVSDVLVNDIPHLFNSLTSYFSGEGVQKLASDLAEFHAEGKIVIRPNPFWTTAHYFGRLPDVAPKLLSDLEQSDMVIFKGDLNFRKLTGDCEWPHTTPFAEALGPIAGKFNILALRTIKADVVVGLGKGVYEEIAKDNPHWERTGKYAVVEFCPKD
Canonical Sequence ...
SMGLKLLHPPKPYAMTSDPESYASVCVMKKWPIIATNVIDEVSRNISKALEAGMSDKAAYVTQGKEIISLLNQLKYDLQHNRPLKPLVGQGPDIDDYNEELEQVGPLTWGDAPWLYAGCYFYRIMSLFFQARSEWNRHDPFFEQKDFTLRSSKSAIEEFAKRYVHLNSELASIQENKDDKAAYMIFVEMAEISLWGNAIDLGLLVNATYEQLQSLQGQKAVEESQKNILVNDFPKIWSKLSKVRHGRIDFVLNNAGFELFVDLLFATYLLKTEIAETIILHPKDVPWFVSDVLVNDIPHLFNSLTSYFSGEGVQKLASDLAEFHAEGKIVIRPNPFWTTAHYFGRLPDVAPKLLSDLEQSDMVIFKGDLNFRKLTGDCEWPHTTPFAEALGPIAGKFNILALRTIKADVVVGLGKGVYEEIAKDNPHWERTGKYAVVEFCPKD
Non polymer #2
CL
InChI=1S/ClH/h1H/p-1
InChI=1S/ClH/h1H/p-1
SMILES: [Cl-]
[Cl-]
Non polymer #3
CO
InChI=1S/Co/q+2
InChI=1S/Co/q+2
SMILES: [Co+2]
[Co+2]
Non polymer #4
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Non polymer #5
PEG
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
SMILES: C(COCCO)O
C(COCCO)O
Non polymer #6
PGE
InChI=1S/C6H14O4/c7-1-3-9-5-6-10-4-2-8/h7-8H,1-6H2
InChI=1S/C6H14O4/c7-1-3-9-5-6-10-4-2-8/h7-8H,1-6H2
SMILES: C(COCCOCCO)O
C(COCCOCCO)O
Non polymer #7
PO4
InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
SMILES: [O-]P(=O)([O-])[O-]
[O-]P(=O)([O-])[O-]
Non polymer #8
ZN
InChI=1S/Zn/q+2
InChI=1S/Zn/q+2
SMILES: [Zn+2]
[Zn+2]
Biounit #1
monomer
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Model
Reference
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