2024-06-15_00000212|hard|8UGL

High resolution in-situ structure of complex IV in respiratory supercomplex; Electron microscopy 3.00Å
Protein #1 514 residues (100% resolved)

MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINLK

MFVNRWLYSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNQAWAKIHFVIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTAWNTISSMGSFISLTAVMLMIFIIWEAFASKREVSAVELTSTNLEWLHGCPPPYHTFEEPTYINLK
Protein #2 229 residues (99% resolved)

(FME)AYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG

MAYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLTFDSYMIPTSDLKPGEMRLLEVDNRVVLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSTSMLTG
Protein #3 261 residues (99% resolved)

MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS

MTHQTHAYHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMLLLSLGLLTNTLTMYQWWRDIIRESTFQGHHTSVVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSILLASGVSITWAHHSLMEGDRKHMIQALSITIALGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLAVCLLRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
Protein #4 169 residues (82% resolved)

MLATRVFNLIGRRAISTSVCVRAHGSVVKSEDYALPVYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSMDEKVELYRLKFNESFAEMNRSTNEWKTIVGTALFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK

MLATRVFNLIGRRAISTSVCVRAHGSVVKSEDYALPVYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSMDEKVELYRLKFNESFAEMNRSTNEWKTIVGTALFFIGFTALLLIWEKHYVYGPIPHTFEEEWVAKQTKRMLDMKVAPIQGFSAKWDYDKNEWKK
Protein #5 152 residues (69% resolved)

MLGAAVRRCSVAAAAVARASPRGLLHPTPTPGPAAAIQSIRCYSHGSHETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV

MLGAAVRRCSVAAAAVARASPRGLLHPTPTPGPAAAIQSIRCYSHGSHETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV
Protein #6 129 residues (75% resolved)

MASRLLRGAGALAAQTLRARGPNGVAVVRSMASGGGVPTDEEQATGLEREVMMAARKGLDPYNILAPKAASGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWVHKGETQRCPSCGTHYKLVSHQLAH

MASRLLRGAGALAAQTLRARGPNGVAVVRSMASGGGVPTDEEQATGLEREVMMAARKGLDPYNILAPKAASGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWVHKGETQRCPSCGTHYKLVSHQLAH
Protein #7 97 residues (77% resolved)

MALPLRSLSRGLASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHHHRPEFIPYHHLRIRTKPYSWGDGNHTLFHNPRVNPLPTGYEQP

MALPLRSLSRGLASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHHHRPEFIPYHHLRIRTKPYSWGDGNHTLFHNPRVNPLPTGYEQP
Protein #8 86 residues (95% resolved)

MAEDIQTKIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSFCPISWVSAWDDRRAEGTFPGKI

MAEDIQTKIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSFCPISWVSAWDDRRAEGTFPGKI
Protein #9 75 residues (89% resolved)

MATSSLTKPQMRGLLAKRLRFHIVGAFIVSLGVATFYKFAVAEPRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK

MATSSLTKPQMRGLLAKRLRFHIVGAFIVSLGVATFYKFAVAEPRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK
Protein #10 80 residues (73% resolved)

MRALRVSQALVRSFSSTARNRLENRVAEKQKIFQADNDLPVHLKGGATDNILYRVTMTLCLGGTVYSLYCLGWASFPHKK

MRALRVSQALVRSFSSTARNRLENRVAEKQKIFQADNDLPVHLKGGATDNILYRVTMTLCLGGTVYSLYCLGWASFPHKK
Protein #11 80 residues (61% resolved)

MFPLAKNALSRLRVRNIQQTMARQNHQKRAPDFHDKYGNAILASGATFCVAVWAYTATQIGIEWNLSPVGRVTPKEWREE

MFPLAKNALSRLRVRNIQQTMARQNHQKRAPDFHDKYGNAILASGATFCVAVWAYTATQIGIEWNLSPVGRVTPKEWREE
Protein #12 63 residues (73% resolved)

MLGQSIRRFTTSVVRRSHYEEGPGKNLPFSVENKWRLLAMMTLYFGSGFAAPFFIVRHQLLKK

MLGQSIRRFTTSVVRRSHYEEGPGKNLPFSVENKWRLLAMMTLYFGSGFAAPFFIVRHQLLKK
Protein #13 70 residues (61% resolved)

MLRLAPTVRLLQAPLGGWVVPKAHIYAKPARTPTSPTEQAIGLSVTFLSFLIPAGWVLSHLDHYKRSSAA

MLRLAPTVRLLQAPLGGWVVPKAHIYAKPARTPTSPTEQAIGLSVTFLSFLIPAGWVLSHLDHYKRSSAA
Protein #14 82 residues (100% resolved)

MLRQIITQAKKHPSLIPLFVFIGAGGTGAALYVTRLALFNPDVCWDRKNNPEPWNKLGPNDQYKFFAVNVDYSKLKKEGPDF

MLRQIITQAKKHPSLIPLFVFIGAGGTGAALYVTRLALFNPDVCWDRKNNPEPWNKLGPNDQYKFFAVNVDYSKLKKEGPDF
Non polymer #15 CDL

InChI=1S/C81H158O17P2/c1-5-9-13-17-21-25-29-33-37-41-45-49-53-57-61-65-78(83)91-71-76(97-80(85)67-63-59-55-51-47-43-39-35-31-27-23-19-15-11-7-3)73-95-99(87,88)93-69-75(82)70-94-100(89,90)96-74-77(98-81(86)68-64-60-56-52-48-44-40-36-32-28-24-20-16-12-8-4)72-92-79(84)66-62-58-54-50-46-42-38-34-30-26-22-18-14-10-6-2/h75-77,82H,5-74H2,1-4H3,(H,87,88)(H,89,90)/p-2/t76-,77-/m1/s1

CCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)([O-])OCC(COP(=O)([O-])OC[C@@H](COC(=O)CCCCCCCCCCCCCCCCC)OC(=O)CCCCCCCCCCCCCCCCC)O)OC(=O)CCCCCCCCCCCCCCCCC
Non polymer #16 CU

InChI=1S/Cu/q+2

[Cu+2]
Non polymer #17 CUA

InChI=1S/2Cu

[Cu][Cu]
Non polymer #18 HEA

InChI=1S/C49H58N4O6.Fe/c1-9-34-31(6)39-25-45-49(46(55)18-12-17-30(5)16-11-15-29(4)14-10-13-28(2)3)33(8)40(52-45)24-44-37(27-54)36(20-22-48(58)59)43(53-44)26-42-35(19-21-47(56)57)32(7)38(51-42)23-41(34)50-39;/h9,13,15,17,23-27,46,55H,1,10-12,14,16,18-22H2,2-8H3,(H4,50,51,52,53,54,56,57,58,59);/q;+2/p-2/b29-15+,30-17+,38-23-,39-25-,40-24-,41-23-,42-26-,43-26-,44-24-,45-25-;/t46-;/m0./s1

Cc1c2n3c(c1C=C)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C=O)CCC(=O)O)C(=C(C7=C2)[C@H](CC/C=C(C)/CC/C=C(C)/CCC=C(C)C)O)C)CCC(=O)O)C
Non polymer #19 MG

InChI=1S/Mg/q+2

[Mg+2]
Non polymer #20 NA

InChI=1S/Na/q+1

[Na+]
Non polymer #21 PEK

InChI=1S/C43H78NO8P/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-43(46)52-41(40-51-53(47,48)50-38-37-44)39-49-42(45)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h11,13,17,19,22,24,28,30,41H,3-10,12,14-16,18,20-21,23,25-27,29,31-40,44H2,1-2H3,(H,47,48)/b13-11-,19-17-,24-22-,30-28-/t41-/m1/s1

CCCCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCCN)OC(=O)CCCC=C/CC=C/CC=C/CC=C/CCCCC
Non polymer #22 PGV

InChI=1S/C40H77O10P/c1-3-5-7-9-11-13-15-17-18-20-22-24-26-28-30-32-40(44)50-38(36-49-51(45,46)48-34-37(42)33-41)35-47-39(43)31-29-27-25-23-21-19-16-14-12-10-8-6-4-2/h13,15,37-38,41-42H,3-12,14,16-36H2,1-2H3,(H,45,46)/b15-13-/t37-,38+/m0/s1

CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OC[C@H](CO)O)OC(=O)CCCCCCCCCC=C/CCCCCC
Non polymer #23 PO4

InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3

[O-]P(=O)([O-])[O-]
Non polymer #24 PSC

InChI=1S/C42H80NO8P/c1-6-8-10-12-14-16-18-20-21-23-25-27-29-31-33-35-42(45)51-40(39-50-52(46,47)49-37-36-43(3,4)5)38-48-41(44)34-32-30-28-26-24-22-19-17-15-13-11-9-7-2/h14,16,20-21,40H,6-13,15,17-19,22-39H2,1-5H3/p+1/b16-14+,21-20-/t40-/m1/s1

CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OCC[N+](C)(C)C)OC(=O)CCCCCCCC=C/CC=CCCCCC
Non polymer #25 ZN

InChI=1S/Zn/q+2

[Zn+2]
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Reference