2024-06-15_00000181
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hard
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8TR3
Cryo-EM structure of HmAb64 scFv in complex with CNE40 SOSIP trimer;
Electron microscopy 3.74Å
Protein #1
489 residues (64% resolved)
Raw Sequence ...
GNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPADPNPQEMLLKNVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNVKINSTSNETCIDSGNNSTCNETYKEMRNCSFNATTVVRDKQQKMYALFYKLDIVPLNSGYKNSSDETYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLKEPVNITCERPNNNTRKSIRIGPGQTFYATGDIIGNIREAHCNISRSQWNKTLQGVGEKLAELFPNKTIVFKNSSGGDLEITTHSFNCRGEFFYCNTTDLFNSTYWSNGTYITQSNSSSINITLPCRIKQIINMWQEVGRAIYAPPIAGQITCISNITGLLLLRDGGKEANGTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTKCRRRVVERRRRRR
Canonical Sequence ...
GNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPADPNPQEMLLKNVTENFNMWKNEMVNQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNVKINSTSNETCIDSGNNSTCNETYKEMRNCSFNATTVVRDKQQKMYALFYKLDIVPLNSGYKNSSDETYRLINCNTSAITQACPKVSFDPIPIHYCTPAGYALLKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLKEPVNITCERPNNNTRKSIRIGPGQTFYATGDIIGNIREAHCNISRSQWNKTLQGVGEKLAELFPNKTIVFKNSSGGDLEITTHSFNCRGEFFYCNTTDLFNSTYWSNGTYITQSNSSSINITLPCRIKQIINMWQEVGRAIYAPPIAGQITCISNITGLLLLRDGGKEANGTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTKCRRRVVERRRRRR
Protein #2
153 residues (86% resolved)
Raw Sequence ...
AVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAPEAQQHLLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDREINNYTDIIYRLLEESQNQQENNEEDLLALD
Canonical Sequence ...
AVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAPEAQQHLLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICCTAVPWNSSWSNKSQTEIWNNMTWMQWDREINNYTDIIYRLLEESQNQQENNEEDLLALD
Protein #3
124 residues (100% resolved)
Raw Sequence ...
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDITWVRQAPGQGLEWMGWISAYNGDTNYAQRLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARAKHTVLVTAMRWFDPWGQGTLVTVSS
Canonical Sequence ...
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDITWVRQAPGQGLEWMGWISAYNGDTNYAQRLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARAKHTVLVTAMRWFDPWGQGTLVTVSS
Protein #4
109 residues (99% resolved)
Raw Sequence ...
DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLISATSSLQSGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQSYSTPWTFGQGTKLEIKRT
Canonical Sequence ...
DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLISATSSLQSGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCQQSYSTPWTFGQGTKLEIKRT
Non polymer #5
NAG
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
SMILES: CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
Biounit #1
hetero-3-3-3-3-6-mer
Download coordinates
Tube
Model
Reference
100%