2024-05-18_00000073
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ligand
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8P1S
Bifidobacterium asteroides alpha-L-fucosidase (TT1819) in complex with fucose.;
X-ray diffraction 1.90Å
Protein #1
342 residues (98% resolved)
Raw Sequence ...
MSDTVEWFKQAKYGMMIHWGLYSLLGGEYQGKSSSNYAEWVQSKLQIPNKEYERLTQAFNPIYFDADAIIDLAKRCGMQYLVVTTKHHDGFAMYRSLVDPYNVYDATPFHRDVIGELSLACRKAGLRFGLYYSQDLDWHEPDGGGYLSNDIETAGTTWDNSWDFTGEKNYDRAFKHKIMPQIEEIMSNYGEISVAWFDVPMTLSDEQSQTIYDTVKRLQPDCLINSRLGNGRYDYVSLGDNEIPEDSDASDKATSDGNVDYNSIEGFKPSKLGLYETAGTINDSWGFAYHDQNWKSPQTIHDYKAHLNKYGINYLLNVGLDGLGRVPMAAEQALLGARALEA
Canonical Sequence ...
MSDTVEWFKQAKYGMMIHWGLYSLLGGEYQGKSSSNYAEWVQSKLQIPNKEYERLTQAFNPIYFDADAIIDLAKRCGMQYLVVTTKHHDGFAMYRSLVDPYNVYDATPFHRDVIGELSLACRKAGLRFGLYYSQDLDWHEPDGGGYLSNDIETAGTTWDNSWDFTGEKNYDRAFKHKIMPQIEEIMSNYGEISVAWFDVPMTLSDEQSQTIYDTVKRLQPDCLINSRLGNGRYDYVSLGDNEIPEDSDASDKATSDGNVDYNSIEGFKPSKLGLYETAGTINDSWGFAYHDQNWKSPQTIHDYKAHLNKYGINYLLNVGLDGLGRVPMAAEQALLGARALEA
Non polymer #2
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #3
FUC
InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1
InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1
SMILES: C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
Non polymer #4
IMD
InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5)/p+1
InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5)/p+1
SMILES: c1c[nH+]c[nH]1
c1c[nH+]c[nH]1
Non polymer #5
TRS
InChI=1S/C4H11NO3/c5-4(1-6,2-7)3-8/h6-8H,1-3,5H2/p+1
InChI=1S/C4H11NO3/c5-4(1-6,2-7)3-8/h6-8H,1-3,5H2/p+1
SMILES: C(C(CO)(CO)[NH3+])O
C(C(CO)(CO)[NH3+])O
Biounit #1
homo-hexamer
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Model
Reference
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