2024-05-18_00000053|ligand|8OVS

Crystal structure of YeGT glycosyltransferase with bound UDP; X-ray diffraction 1.12Å

Protein #1 299 residues (92% resolved)

Raw Sequence ...

GSMQYFAQIVNREENKWPSEPINKYIHMIWIGPKNISDKNIRLSLQTAQKNPDYSTTIIYDSGISGYEAARNFMSEKFKASKITLVDIRNKGYFHQLQQEPSFTYYEEVIRNKKFAQASDILRLLVLKYEGGIYKDIDDIQIKGFGSLAFPKGIGVMREYVPEAGKSAAFPNSPIAATKNNPVVNKTLELAVENYRHGEKNVLKLAGPDVFTKALYQEIPGMCSQVLGTQLEQFELAKRQALKMPLEKPKSFIDEQLTLQEKAKISRPYKAIRGLSEYVCNGADHSWATDMLGSSTKMY

Canonical Sequence ...

Non polymer #2 ACT

InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)/p-1

SMILES: CC(=O)[O-]

CC(=O)[O-]

Non polymer #3 CD

InChI=1S/Cd/q+2

SMILES: [Cd+2]

[Cd+2]

Non polymer #4 EDO

InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2

SMILES: C(CO)O

C(CO)O

Non polymer #5 MN

InChI=1S/Mn/q+2

SMILES: [Mn+2]

[Mn+2]

Non polymer #6 NA

InChI=1S/Na/q+1

SMILES: [Na+]

[Na+]

Non polymer #7 UDP

InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1

SMILES: C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)OP(=O)(O)O)O)O

C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)OP(=O)(O)O)O)O

Biounit #1 monomer

Biounit #2 monomer

Reference