2024-03-30_00000024
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ligand
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8IXQ
Structure of glycosyltransferase LmbT in complex with GDP and ergothioneine;
X-ray diffraction 2.10Å
Protein #1
451 residues (95% resolved)
Raw Sequence ...
MTARTERGRALAFVWLMVEGAQVAAGGVAGYVRNLLDEQDALRDHLAERGWSVEFVLGEPFYDPGAPGYDEERWRRVREHLAARGGRAVRLVSDSDGLDGWGEERFFHALSATGAQLVLDTAERCDAVVAVSGTSAFARVPGMVQRQGGELAAKVLHVHTFGLATHDTAHVPSPAEIAADGDVAFWTRQSDRVSVGYISRYTAELYARTYAIPAAALLPNRSAIPRHAPRFGVLTEERINERIAGLGLPAEGEFVVMWGRNSAPGLDKGYHLLLEAARDLPGVVPVIATRRPDPGLRRLADRYAVPAVLLDDQPFTHLSALLQSPRTLAAAFLGEAEPGAVSPMEAMWVARESGALVIAADTGNLPEVVDDGAAGIVTRRTAADVADAVRRVRKLTADERRRMRAAAAARVRARFDFAANVRELADAAVDRLAEVSKLAAALEHHHHHHHH
Canonical Sequence ...
MTARTERGRALAFVWLMVEGAQVAAGGVAGYVRNLLDEQDALRDHLAERGWSVEFVLGEPFYDPGAPGYDEERWRRVREHLAARGGRAVRLVSDSDGLDGWGEERFFHALSATGAQLVLDTAERCDAVVAVSGTSAFARVPGMVQRQGGELAAKVLHVHTFGLATHDTAHVPSPAEIAADGDVAFWTRQSDRVSVGYISRYTAELYARTYAIPAAALLPNRSAIPRHAPRFGVLTEERINERIAGLGLPAEGEFVVMWGRNSAPGLDKGYHLLLEAARDLPGVVPVIATRRPDPGLRRLADRYAVPAVLLDDQPFTHLSALLQSPRTLAAAFLGEAEPGAVSPMEAMWVARESGALVIAADTGNLPEVVDDGAAGIVTRRTAADVADAVRRVRKLTADERRRMRAAAAARVRARFDFAANVRELADAAVDRLAEVSKLAAALEHHHHHHHH
Non polymer #2
GDP
InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
SMILES: c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
Non polymer #3
LW8
InChI=1S/C9H15N3O2S/c1-12(2,3)7(8(13)14)4-6-5-10-9(15)11-6/h5,7H,4H2,1-3H3,(H2-,10,11,13,14,15)/p+1/t7-/m0/s1
InChI=1S/C9H15N3O2S/c1-12(2,3)7(8(13)14)4-6-5-10-9(15)11-6/h5,7H,4H2,1-3H3,(H2-,10,11,13,14,15)/p+1/t7-/m0/s1
SMILES: C[N+](C)(C)[C@@H](CC1=CNC(=S)N1)C(=O)O
C[N+](C)(C)[C@@H](CC1=CNC(=S)N1)C(=O)O
Biounit #1
homo-tetramer
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Model
Reference
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