2024-01-20_00000270
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medium
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8VDW
X-Ray Crystal Structure of the biotin synthase from V. parvula;
X-ray diffraction 1.81Å
Protein #1
364 residues (91% resolved)
Raw Sequence ...
MHHHHHHSSGVDLGTENLYFQSMALPIDQQPSQVGTYEKILTIANRIMNGGEITKEEAIELIHTSDDDTMILLAMADKIRQHFNDNSVDVCAIVNARSGKCPENCKFCAQSAHHNTGVQEYPFMDEESILQAARKAKEAGAIRFSIVTSGRNTNNPDEFDQIIHVLGRIKNEIGLEICCSLGLLTYEQALKLKEVGVTRYHSNIETAPSHFPDICTTHSYEDKMFTIDNAQKAGIRVCSGGILGLNETLEQRVEMAFELKRLHIDSVPLNILNPVKGTPFESNEALRPLDILRTFAVFRFILPNALIRTAGGREVNLRDLQAYALKGGLNGIMVGGYLTTGGRSPQDDLQMIQDLELTRNTAQV
Canonical Sequence ...
MHHHHHHSSGVDLGTENLYFQSMALPIDQQPSQVGTYEKILTIANRIMNGGEITKEEAIELIHTSDDDTMILLAMADKIRQHFNDNSVDVCAIVNARSGKCPENCKFCAQSAHHNTGVQEYPFMDEESILQAARKAKEAGAIRFSIVTSGRNTNNPDEFDQIIHVLGRIKNEIGLEICCSLGLLTYEQALKLKEVGVTRYHSNIETAPSHFPDICTTHSYEDKMFTIDNAQKAGIRVCSGGILGLNETLEQRVEMAFELKRLHIDSVPLNILNPVKGTPFESNEALRPLDILRTFAVFRFILPNALIRTAGGREVNLRDLQAYALKGGLNGIMVGGYLTTGGRSPQDDLQMIQDLELTRNTAQV
Non polymer #2
DTB
InChI=1S/C10H18N2O3/c1-7-8(12-10(15)11-7)5-3-2-4-6-9(13)14/h7-8H,2-6H2,1H3,(H,13,14)(H2,11,12,15)/t7-,8+/m0/s1
InChI=1S/C10H18N2O3/c1-7-8(12-10(15)11-7)5-3-2-4-6-9(13)14/h7-8H,2-6H2,1H3,(H,13,14)(H2,11,12,15)/t7-,8+/m0/s1
SMILES: C[C@H]1[C@H](NC(=O)N1)CCCCCC(=O)O
C[C@H]1[C@H](NC(=O)N1)CCCCCC(=O)O
Non polymer #3
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Non polymer #4
Q46
InChI=1S/4Fe.H2S.4S/h;;;;1H2;;;;/q;;;+1;;4*+1/p-1
InChI=1S/4Fe.H2S.4S/h;;;;1H2;;;;/q;;;+1;;4*+1/p-1
SMILES: S[Fe]12[S+]3[Fe]4[S+]1[Fe]5[S+]4[Fe]3[S+]25
S[Fe]12[S+]3[Fe]4[S+]1[Fe]5[S+]4[Fe]3[S+]25
Non polymer #5
SAM
InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/t7-,8+,10+,11+,14+,27-/m0/s1
InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/t7-,8+,10+,11+,14+,27-/m0/s1
SMILES: C[S@@+](CC[C@@H](C(=O)[O-])N)C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
C[S@@+](CC[C@@H](C(=O)[O-])N)C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
Non polymer #6
SF4
InChI=1S/4Fe.4S
InChI=1S/4Fe.4S
SMILES: [S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
Biounit #1
homo-dimer
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Model
Reference
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